- 1. SCCmec types from I to XV
- (SCCmec structure)
- Created on 24 January 2022
- 2. SCCmec I subtypes list
- (SCCmec types List)
- SCCmec I subtype Representative strain (GenBank accession No. ) Source Country Reported in Subtyping by Reference articles a NCTC10442(AB033763) ...
- Created on 18 December 2021
- 3. SCCmec II subtypes list
- (SCCmec types List)
- SCCmec II subtype Representative strain (GenBank accession No. or NCBI reference sequence No.) Source Country Reported in Subtyping by Reference articles ...
- Created on 17 December 2021
- 4. Requirement to report new SCCmec
- (SCCmec structure)
- SCCmec is defined by the characteristics listed below: It carries a mec gene complex, a ccr gene(s) (ccrAB and/or ccrC), its regulatory genes, such as mecI and mecR1, and the insertion sequence ...
- Created on 21 June 2021
- 5. How to report new SCCmec and SCCmec subtype
- (How to report new SCCmec)
- IWG-SCC has decided not to annotate new SCCmec subtypes in other species than S. aureus, due to the high complexity of the elements found in isolates other than S. aureus. An alternative nomenclature ...
- Created on 24 May 2021
- 6. SCCmec V subtypes list
- (SCCmec types List)
- SCCmec V subtype Representative strain Source Country Reported in Subtyping by Reference articles a (5C2) WIS(WBG8318) (AB121219) ...
- Created on 24 May 2021
- 7. SCCmec IV subtypes list
- (SCCmec types List)
- SCCmec IV subtype Representative strain (GenBank accession No.) Source Country No. of isolates Reported in Subtyping by Reference articles a ...
- Created on 24 May 2021
- 8. SCCmec types list
- (SCCmec types List)
- SCCmec type ccr complex mec complex SCCmec type Representative strain (GenBank accession No.) Source Country Reported in Reference articles ...
- Created on 24 May 2021
- 9. Description of SCCmec in two ways
- (SCCmec structure)
- Description of SCCmec in two ways Examples:
- Created on 24 May 2021
- 10. SCCmec structure examples: I, II, III
- (SCCmec structure)
- SCCmec structure examples: type I, II and III IWG-SCC commentary Antimicrob Agents Chemother. 2009 Dec;53(12):4961-7.
- Created on 24 May 2021
- 11. How to report new SCCmec and SCCmec subtype
- (How to report new SCCmec)
- How to report new SCCmec and SCCmec subtype Before reporting/publishing new SCCmec and/or SCCmec subtype, researchers should contact the curator and obtain approval from IWG-SCC, to avoid duplicated ...
- Created on 23 May 2021
- 12. SCCmec structure
- (Uncategorised)
- SCCmec is defined by the characteristics listed below: It carries the class A mec gene complex, consisting of mecA, its regulatory genes, mecI and mecR1, and the insertion sequence IS431. It ...
- Created on 22 May 2021
- 13. SCCmec The basics
- (the basics)
- The SCCmec element carried by preMRSA N315 was characterized first by cloning the chromosomal region surrounding mecA, which was not carried by MSSA strains and was called “mecDNA” or “additional DNA”. ...
- Created on 22 May 2021
- 14. Strain list
- (Strain request)
- SCCmec type Strain name Permission by the original strain holder necessary Statens Serum Institut (SSI), Denmark National Institute of Infectious Diseases (NIID), Japan ...
- Created on 17 December 2021
- 15. WGS-based method
- (Methods to identify SCCmec)
- WGS-based method SCCmec Finder https://cge.cbs.dtu.dk/services/SCCmecFinder/ Reference Kaya H, Hasman H, Larsen J, Stegger M, Johannesen TB, Allesoe RL et al (2018) SCCmecFinder, a web-based ...
- Created on 24 May 2021
- 16. Top Page
- (Uncategorised)
- This is the top page of SCCmec site.
- Created on 22 May 2021